BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003C11LP1|AL425100
(1014 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1247 1529 0.0
>3x_Contig1247
Length = 7218
Score = 1529 bits (771), Expect = 0.0
Identities = 794/799 (99%), Gaps = 2/799 (0%)
Strand = Plus / Plus
Query: 1 gatcaatacaccaagtttggtttgtcaccatcgaagggtgtgttgttctacggtcctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6420 gatcaatacaccaagtttggtttgtcaccatcgaagggtgtgttgttctacggtcctcct 6479
Query: 61 ggtactggtaagactttgttagctaaggctgtcgccaccgaagtgtctgctaatttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6480 ggtactggtaagactttgttagctaaggctgtcgccaccgaagtgtctgctaatttcatt 6539
Query: 121 tcggtcaagggtcctgagttattaagtatgtggtacggtgagtccgaatccaatatccgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6540 tcggtcaagggtcctgagttattaagtatgtggtacggtgagtccgaatccaatatccgt 6599
Query: 181 gatattttcgacaaagccagagctgcagccccaactgtcgttttcttagatgaattggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6600 gatattttcgacaaagccagagctgcagccccaactgtcgttttcttagatgaattggac 6659
Query: 241 tccattgctaaggctcgtggtggttctttaggtgatgcaggtggtgcatctgacagagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6660 tccattgctaaggctcgtggtggttctttaggtgatgcaggtggtgcatctgacagagtg 6719
Query: 301 gttaaccaattattgaccgaaatggatggtatgaacgccaagaagaacgttttcgttatt 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6720 gttaaccagttattgaccgaaatggatggtatgaacgccaagaagaacgttttcgttatt 6779
Query: 361 ggtgccactaacagaccagatcaaatcgatccagctattttaagacctggtagattggat 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6780 ggtgccactaacagaccagatcaaatcgatccagctattttcagacctggtagattggat 6839
Query: 421 caattgatctacgttccattaccagacgaaacaggaagattatctattctatcagcccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6840 caattgatctacgttccattaccagacgaaacaggaagattatctattctatcagcccaa 6899
Query: 481 ttaagaaatacaccattagaaccaggactagatctaaagaccatcgctcaagctacacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6900 ttaagaaatacaccattagaaccaggactagatctaaagaccatcgctcaagctacacag 6959
Query: 541 ggattctctggtgcagatttattatatatcgtacagagagctgcgaagtttgccattaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6960 ggattctctggtgcagatttattatatatcgtacagagagctgcgaagtttgccattaaa 7019
Query: 601 gattccatcgaggcacaaaaacgtgcagaagttgtcaagaaagaagaaggtgcagaagaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7020 gattccatcgaggcacaaaaacgtgcagaagttgtcaagaaagaagaaggtgcagaagaa 7079
Query: 661 accgagaaggtcaagacagaagaagacg-ttgaaatgtcagacgttcaacaagaggatcc 719
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 7080 accgagaaggtcaagacagaagaagacgtttgaaatgtcagacgttcaacaagaggatcc 7139
Query: 720 agttccattca-ttaccaaagaacacttcactgaagctatgaaaacagccaagcgttctg 778
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7140 agttccattcatttaccaaagaacacttcactgaagctatgaaaacagccaagcgttctg 7199
Query: 779 ttacagatactgagcttcg 797
||||||||||||| |||||
Sbjct: 7200 ttacagatactgaccttcg 7218
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7358
Number of Sequences: 1807
Number of extensions: 7358
Number of successful extensions: 79
Number of sequences better than 1.0e-20: 1
length of query: 1014
length of database: 10,358,551
effective HSP length: 16
effective length of query: 998
effective length of database: 10,329,639
effective search space: 10308979722
effective search space used: 10308979722
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)